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suredesign software  (Agilent technologies)


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    Structured Review

    Agilent technologies suredesign software
    Suredesign Software, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/suredesign+software/pmc10920333-31-22-24
    Average 90 stars, based on 1 article reviews
    suredesign software - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Software:

    Article Title: The genetic landscape of mitochondrial diseases in the next-generation sequencing era: a Portuguese cohort study
    Article Snippet: For DNA studies, we employed a NGS-guided strategy performed on a MiSeq Illumina platform. .. Using a SureSelect XT HS Kit (Agilent Technologies, Santa Clara, CA, United States), a set of targeted nuclear gene panels designed with SureDesign software (Agilent Technologies) was captured. ..

    Article Title: Three-dimensional genomic mapping of human pancreatic tissue reveals striking multifocality and genetic heterogeneity in precancerous lesions
    Article Snippet: The commercially available ClearSeq Comprehensive Cancer (Agilent; Santa Clara, CA) targeted panel was selected. .. Using the Agilent SureDesign software, we customized the panel to induce baits for the coding regions of additional genes important in pancreatic cancer development. ..

    Article Title: Development of a Novel NGS Methodology for Ultrasensitive Circulating Tumor DNA Detection as a Tool for Early-Stage Breast Cancer Diagnosis
    Article Snippet: .. The custom NGS panel for BC was designed using the SureDesign software (Agilent, Santa Clara, CA, USA) with the next settings: 5x for tiling, least stringent for masking, XTHSBoosting for Boosting and a value of 30 for extension into repeats. .. SureSelect XT HS (Agilent, Santa Clara, CA, USA) methodology was employed to generate sequencing libraries.

    Article Title: A feasible molecular diagnostic strategy for rare genetic disorders within resource-constrained environments
    Article Snippet: .. The Agilent SureDesign software (version 7.0.2.12) (Agilent technologies, CA, USA) was used to design the targeted panel, with a total probe region size of less than 499 kb. ..

    Article Title: Genetic Screening of a Hungarian Cohort with Focal Dystonia Identified Several Novel Putative Pathogenic Gene Variants
    Article Snippet: .. RNA probes for the selected loci were designed with SureDesign software (19 July 2009, Agilent Technologies, Santa Clara, CA, USA), and the SureSelect QXT Reagent Kit (Agilent Technologies, Santa Clara, CA, USA) was used for the preparation of libraries. .. NGS was carried out on an Illumina NextSeq 550 NGS platform using the 300-cycle Mid Output Kit v2.5 (Illumina, Inc., San Diego, CA, USA).

    Article Title: Leigh Syndrome Spectrum: A Portuguese Population Cohort in an Evolutionary Genetic Era
    Article Snippet: .. A custom-made targeted nuclear gene panel was designed using Suredesign software (Agilent 2023 7.10.1.1, Agilent Technologies, Santa Clara, CA, USA) and includes 209 nuclear genes, from which 188 were known to be involved in MD and 21 were candidates based on their role or participation in different pathways that include genes responsible for clinical presentations mimicking MD ( ). .. Genes of interest were captured with a SureSelect QXT kit (Agilent Technologies), followed by sequencing on the Illumina MiSeq platform.

    other:

    Article Title: Congenital Myopathy as a Phenotypic Expression of CACNA1S Gene Mutation: Case Report and Systematic Review of the Literature
    Article Snippet: This panel was realized using SureSelect technology (Agilent, Santa Clara, CA, USA) and SureDesign sofware (version 7.10.0.6 earray.chem.agilent.com/suredesign/ accessed on 7 June 2023).

    Next-Generation Sequencing:

    Article Title: Development of a Novel NGS Methodology for Ultrasensitive Circulating Tumor DNA Detection as a Tool for Early-Stage Breast Cancer Diagnosis
    Article Snippet: .. The custom NGS panel for BC was designed using the SureDesign software (Agilent, Santa Clara, CA, USA) with the next settings: 5x for tiling, least stringent for masking, XTHSBoosting for Boosting and a value of 30 for extension into repeats. .. SureSelect XT HS (Agilent, Santa Clara, CA, USA) methodology was employed to generate sequencing libraries.



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